Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.5□□□□□ -0.41
Lsm3P62311 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lsm3P62311 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Lsm3P62311 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.5□□□□□ -0.41
Lsm3P62311 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.5□□□□□ -0.41
Lsm3P62311 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.5□□□□□ -0.41
Lsm3P62311 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Lsm3P62311 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.5□□□□□ -0.41
Lsm3P62311 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lsm3P62311 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Lsm3P62311 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.49□□□□□ -0.41
Lsm3P62311 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Lsm3P62311 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm3P62311 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.49□□□□□ -0.41
Lsm3P62311 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.49□□□□□ -0.41
Lsm3P62311 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.49□□□□□ -0.41
Lsm3P62311 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.49□□□□□ -0.41
Lsm3P62311 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.49□□□□□ -0.41
Lsm3P62311 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC12.49□□□□□ -0.41
Lsm3P62311 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm3P62311 Gm45098-201ENSMUST00000207179 657 ntBASIC12.49□□□□□ -0.41
Lsm3P62311 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.49□□□□□ -0.41
Lsm3P62311 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm3P62311 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.49□□□□□ -0.41
Lsm3P62311 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.48□□□□□ -0.41
Lsm3P62311 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Lsm3P62311 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Lsm3P62311 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.48□□□□□ -0.41
Lsm3P62311 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.48□□□□□ -0.41
Lsm3P62311 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Lsm3P62311 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm3P62311 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm3P62311 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Lsm3P62311 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lsm3P62311 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lsm3P62311 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm3P62311 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm3P62311 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.47□□□□□ -0.41
Lsm3P62311 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lsm3P62311 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm3P62311 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Lsm3P62311 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms