Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lmo4P61969 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Lmo4P61969 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.07□□□□□ -0.64
Lmo4P61969 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lmo4P61969 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.07□□□□□ -0.64
Lmo4P61969 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.07□□□□□ -0.64
Lmo4P61969 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.07□□□□□ -0.64
Lmo4P61969 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.07□□□□□ -0.64
Lmo4P61969 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.07□□□□□ -0.64
Lmo4P61969 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.07□□□□□ -0.64
Lmo4P61969 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.07□□□□□ -0.64
Lmo4P61969 Gm6007-201ENSMUST00000208170 823 ntBASIC11.07□□□□□ -0.64
Lmo4P61969 Gm29705-201ENSMUST00000212598 474 ntBASIC11.07□□□□□ -0.64
Lmo4P61969 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.07□□□□□ -0.64
Lmo4P61969 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Lmo4P61969 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.07□□□□□ -0.64
Lmo4P61969 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Lmo4P61969 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Lmo4P61969 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Lmo4P61969 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.06□□□□□ -0.64
Lmo4P61969 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lmo4P61969 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.06□□□□□ -0.64
Lmo4P61969 Gm17420-201ENSMUST00000164753 153 ntBASIC11.06□□□□□ -0.64
Lmo4P61969 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lmo4P61969 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Lmo4P61969 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.06□□□□□ -0.64
Lmo4P61969 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.06□□□□□ -0.64
Lmo4P61969 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.06□□□□□ -0.64
Lmo4P61969 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.06□□□□□ -0.64
Lmo4P61969 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Lmo4P61969 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Gm10478-201ENSMUST00000084451 396 ntBASIC11.06□□□□□ -0.64
Lmo4P61969 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Lmo4P61969 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lmo4P61969 Gm15889-202ENSMUST00000212669 2443 ntBASIC11.06□□□□□ -0.64
Lmo4P61969 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Lmo4P61969 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.06□□□□□ -0.64
Lmo4P61969 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Lmo4P61969 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Lmo4P61969 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
Lmo4P61969 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Lmo4P61969 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.05□□□□□ -0.64
Lmo4P61969 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lmo4P61969 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.05□□□□□ -0.64
Lmo4P61969 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lmo4P61969 Gm12203-201ENSMUST00000118235 598 ntBASIC11.05□□□□□ -0.64
Lmo4P61969 Gm12209-201ENSMUST00000120089 596 ntBASIC11.05□□□□□ -0.64
Lmo4P61969 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.05□□□□□ -0.64
Lmo4P61969 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms