Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Gm9682-201ENSMUST00000197505 556 ntBASIC9.83□□□□□ -0.84
Cks1bP61025 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Cks1bP61025 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Cks1bP61025 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Cks1bP61025 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Cks1bP61025 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Gm37500-201ENSMUST00000192059 1443 ntBASIC9.82□□□□□ -0.84
Cks1bP61025 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
Cks1bP61025 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cks1bP61025 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 AC160338.1-201ENSMUST00000214232 705 ntBASIC9.82□□□□□ -0.84
Cks1bP61025 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC9.82□□□□□ -0.84
Cks1bP61025 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cks1bP61025 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Cks1bP61025 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Cks1bP61025 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Cks1bP61025 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC9.82□□□□□ -0.84
Cks1bP61025 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC9.82□□□□□ -0.84
Cks1bP61025 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Cks1bP61025 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Cks1bP61025 Gm3928-201ENSMUST00000121141 1307 ntBASIC9.82□□□□□ -0.84
Cks1bP61025 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Cks1bP61025 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Gm43860-201ENSMUST00000201742 2705 ntBASIC9.81□□□□□ -0.84
Cks1bP61025 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC9.81□□□□□ -0.84
Cks1bP61025 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC9.81□□□□□ -0.84
Cks1bP61025 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.81□□□□□ -0.84
Cks1bP61025 Trav13-3-201ENSMUST00000117226 336 ntBASIC9.81□□□□□ -0.84
Cks1bP61025 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC9.81□□□□□ -0.84
Cks1bP61025 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.81□□□□□ -0.84
Cks1bP61025 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Gm11780-201ENSMUST00000136880 516 ntBASIC9.81□□□□□ -0.84
Cks1bP61025 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC9.81□□□□□ -0.84
Cks1bP61025 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC9.81□□□□□ -0.84
Cks1bP61025 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC9.81□□□□□ -0.84
Cks1bP61025 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cks1bP61025 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC9.81□□□□□ -0.84
Cks1bP61025 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cks1bP61025 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Cks1bP61025 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms