Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Vps33bP59016 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps33bP59016 Gm5846-201ENSMUST00000193146 1414 ntBASIC17.13■□□□□ 0.33
Vps33bP59016 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.12■□□□□ 0.33
Vps33bP59016 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vps33bP59016 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 AC167669.2-201ENSMUST00000224417 1620 ntBASIC17.12■□□□□ 0.33
Vps33bP59016 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Gm13461-201ENSMUST00000120980 662 ntBASIC17.12■□□□□ 0.33
Vps33bP59016 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.12■□□□□ 0.33
Vps33bP59016 Gm5523-201ENSMUST00000180415 997 ntBASIC17.12■□□□□ 0.33
Vps33bP59016 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Vps33bP59016 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps33bP59016 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Vps33bP59016 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Vps33bP59016 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vps33bP59016 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps33bP59016 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Vps33bP59016 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.11■□□□□ 0.33
Vps33bP59016 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Vps33bP59016 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.11■□□□□ 0.33
Vps33bP59016 Gm12502-201ENSMUST00000120197 444 ntBASIC17.11■□□□□ 0.33
Vps33bP59016 Gm11978-201ENSMUST00000122315 466 ntBASIC17.11■□□□□ 0.33
Vps33bP59016 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps33bP59016 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Gm17208-201ENSMUST00000168388 535 ntBASIC17.11■□□□□ 0.33
Vps33bP59016 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Vps33bP59016 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC17.11■□□□□ 0.33
Vps33bP59016 Gm5950-201ENSMUST00000213337 772 ntBASIC17.11■□□□□ 0.33
Vps33bP59016 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vps33bP59016 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps33bP59016 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Vps33bP59016 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps33bP59016 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Vps33bP59016 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Vps33bP59016 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17.1■□□□□ 0.33
Vps33bP59016 Gm11531-201ENSMUST00000117614 555 ntBASIC17.1■□□□□ 0.33
Vps33bP59016 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.1■□□□□ 0.33
Vps33bP59016 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC17.1■□□□□ 0.33
Vps33bP59016 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC17.1■□□□□ 0.33
Vps33bP59016 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.1■□□□□ 0.33
Vps33bP59016 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC17.1■□□□□ 0.33
Vps33bP59016 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps33bP59016 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.1■□□□□ 0.33
Vps33bP59016 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.1■□□□□ 0.33
Vps33bP59016 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.1■□□□□ 0.33
Vps33bP59016 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Vps33bP59016 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.1■□□□□ 0.33
Vps33bP59016 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms