Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.79□□□□□ -0.36
Ptx3P48759 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ptx3P48759 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Ptx3P48759 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Ptx3P48759 Gm12138-201ENSMUST00000122180 951 ntBASIC12.79□□□□□ -0.36
Ptx3P48759 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Gm27701-201ENSMUST00000184498 110 ntBASIC12.79□□□□□ -0.36
Ptx3P48759 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.79□□□□□ -0.36
Ptx3P48759 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.79□□□□□ -0.36
Ptx3P48759 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.79□□□□□ -0.36
Ptx3P48759 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.79□□□□□ -0.36
Ptx3P48759 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.79□□□□□ -0.36
Ptx3P48759 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Ptx3P48759 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ptx3P48759 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ptx3P48759 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ptx3P48759 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.78□□□□□ -0.36
Ptx3P48759 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ptx3P48759 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.78□□□□□ -0.36
Ptx3P48759 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.78□□□□□ -0.36
Ptx3P48759 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
Ptx3P48759 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.78□□□□□ -0.36
Ptx3P48759 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Ptx3P48759 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.78□□□□□ -0.36
Ptx3P48759 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ptx3P48759 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.78□□□□□ -0.36
Ptx3P48759 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ptx3P48759 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptx3P48759 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ptx3P48759 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptx3P48759 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.77□□□□□ -0.36
Ptx3P48759 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.77□□□□□ -0.36
Ptx3P48759 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptx3P48759 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptx3P48759 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Ptx3P48759 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ptx3P48759 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ptx3P48759 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.77□□□□□ -0.36
Ptx3P48759 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptx3P48759 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ptx3P48759 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptx3P48759 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptx3P48759 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ptx3P48759 Gm11524-201ENSMUST00000119349 807 ntBASIC12.77□□□□□ -0.37
Ptx3P48759 Gm15806-201ENSMUST00000120696 955 ntBASIC12.77□□□□□ -0.37
Ptx3P48759 Gm8584-201ENSMUST00000171982 758 ntBASIC12.77□□□□□ -0.37
Ptx3P48759 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.77□□□□□ -0.37
Ptx3P48759 Gm9002-201ENSMUST00000178437 499 ntBASIC12.77□□□□□ -0.37
Ptx3P48759 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.77□□□□□ -0.37
Ptx3P48759 Gm28911-201ENSMUST00000188837 117 ntBASIC12.77□□□□□ -0.37
Ptx3P48759 Gm18187-201ENSMUST00000196476 984 ntBASIC12.77□□□□□ -0.37
Ptx3P48759 Gm43094-201ENSMUST00000196549 921 ntBASIC12.77□□□□□ -0.37
Ptx3P48759 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.77□□□□□ -0.37
Ptx3P48759 Gm19078-201ENSMUST00000206311 727 ntBASIC12.77□□□□□ -0.37
Ptx3P48759 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ptx3P48759 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ptx3P48759 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ptx3P48759 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Ptx3P48759 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms