Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Gm28599-201ENSMUST00000189838 694 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm21867-201ENSMUST00000189917 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm29269-201ENSMUST00000190087 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm21722-201ENSMUST00000190153 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm28423-201ENSMUST00000190701 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm21899-201ENSMUST00000190745 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm21910-201ENSMUST00000191163 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm21849-201ENSMUST00000191571 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm28678-201ENSMUST00000191593 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm20910-201ENSMUST00000193268 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm21871-201ENSMUST00000194621 696 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Gm20553-201ENSMUST00000204205 844 ntBASIC12.88□□□□□ -0.35
Sox2P48432 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.88□□□□□ -0.35
Sox2P48432 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sox2P48432 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sox2P48432 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Sox2P48432 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.87□□□□□ -0.35
Sox2P48432 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Sox2P48432 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox2P48432 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Sox2P48432 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.87□□□□□ -0.35
Sox2P48432 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.87□□□□□ -0.35
Sox2P48432 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Sox2P48432 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.87□□□□□ -0.35
Sox2P48432 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.87□□□□□ -0.35
Sox2P48432 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox2P48432 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Sox2P48432 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.87□□□□□ -0.35
Sox2P48432 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.87□□□□□ -0.35
Sox2P48432 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sox2P48432 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.86□□□□□ -0.35
Sox2P48432 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Sox2P48432 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.86□□□□□ -0.35
Sox2P48432 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Sox2P48432 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.86□□□□□ -0.35
Sox2P48432 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.86□□□□□ -0.35
Sox2P48432 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Sox2P48432 AC090659.1-201ENSMUST00000224334 768 ntBASIC12.86□□□□□ -0.35
Sox2P48432 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Sox2P48432 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms