Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Rfx3P48381 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.44□□□□□ -0.42
Rfx3P48381 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rfx3P48381 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.43□□□□□ -0.42
Rfx3P48381 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Rfx3P48381 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Rfx3P48381 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Rfx3P48381 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfx3P48381 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rfx3P48381 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Rfx3P48381 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.43□□□□□ -0.42
Rfx3P48381 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Rfx3P48381 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.43□□□□□ -0.42
Rfx3P48381 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.43□□□□□ -0.42
Rfx3P48381 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.43□□□□□ -0.42
Rfx3P48381 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.43□□□□□ -0.42
Rfx3P48381 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rfx3P48381 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Rfx3P48381 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Rfx3P48381 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.43□□□□□ -0.42
Rfx3P48381 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.43□□□□□ -0.42
Rfx3P48381 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.43□□□□□ -0.42
Rfx3P48381 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.43□□□□□ -0.42
Rfx3P48381 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.43□□□□□ -0.42
Rfx3P48381 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rfx3P48381 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rfx3P48381 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rfx3P48381 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm22065-201ENSMUST00000103753 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm22066-201ENSMUST00000103761 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm24932-201ENSMUST00000103763 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm24115-201ENSMUST00000103799 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm22190-201ENSMUST00000103827 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm22191-201ENSMUST00000103831 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm24721-201ENSMUST00000103849 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm28018-201ENSMUST00000103869 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm26399-201ENSMUST00000103937 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rfx3P48381 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.42□□□□□ -0.42
Rfx3P48381 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.42□□□□□ -0.42
Rfx3P48381 Gm25349-201ENSMUST00000177728 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm23616-201ENSMUST00000177797 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm25871-201ENSMUST00000177816 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm24752-201ENSMUST00000178240 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm24496-201ENSMUST00000178287 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm25649-201ENSMUST00000178476 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm25548-201ENSMUST00000178681 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm23147-201ENSMUST00000178841 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm26095-201ENSMUST00000179270 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm22171-201ENSMUST00000179283 110 ntBASIC12.42□□□□□ -0.42
Rfx3P48381 Gm23936-201ENSMUST00000179354 110 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms