Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.41□□□□□ -0.1
Rfx2P48379 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.41□□□□□ -0.1
Rfx2P48379 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfx2P48379 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Gm17795-201ENSMUST00000214505 757 ntBASIC14.41□□□□□ -0.1
Rfx2P48379 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.41□□□□□ -0.1
Rfx2P48379 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfx2P48379 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfx2P48379 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfx2P48379 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx2P48379 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfx2P48379 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfx2P48379 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfx2P48379 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rfx2P48379 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfx2P48379 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfx2P48379 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rfx2P48379 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfx2P48379 Gm37714-201ENSMUST00000194742 342 ntBASIC14.4□□□□□ -0.1
Rfx2P48379 Gm5279-201ENSMUST00000199575 745 ntBASIC14.4□□□□□ -0.1
Rfx2P48379 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Gm18027-201ENSMUST00000218947 619 ntBASIC14.4□□□□□ -0.1
Rfx2P48379 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfx2P48379 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfx2P48379 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.4□□□□□ -0.1
Rfx2P48379 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfx2P48379 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rfx2P48379 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfx2P48379 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfx2P48379 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx2P48379 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.39□□□□□ -0.11
Rfx2P48379 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfx2P48379 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Gm12138-201ENSMUST00000122180 951 ntBASIC14.39□□□□□ -0.11
Rfx2P48379 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.39□□□□□ -0.11
Rfx2P48379 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.39□□□□□ -0.11
Rfx2P48379 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfx2P48379 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.39□□□□□ -0.11
Rfx2P48379 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.39□□□□□ -0.11
Rfx2P48379 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.39□□□□□ -0.11
Rfx2P48379 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.39□□□□□ -0.11
Rfx2P48379 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.39□□□□□ -0.11
Rfx2P48379 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.39□□□□□ -0.11
Rfx2P48379 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.39□□□□□ -0.11
Rfx2P48379 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx2P48379 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms