Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nkx2-2P42586 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.6□□□□□ -0.39
Nkx2-2P42586 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.6□□□□□ -0.39
Nkx2-2P42586 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm22189-201ENSMUST00000103822 86 ntBASIC12.6□□□□□ -0.39
Nkx2-2P42586 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.6□□□□□ -0.39
Nkx2-2P42586 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nkx2-2P42586 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.59□□□□□ -0.39
Nkx2-2P42586 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.59□□□□□ -0.39
Nkx2-2P42586 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Gm15770-201ENSMUST00000117498 584 ntBASIC12.59□□□□□ -0.39
Nkx2-2P42586 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Auts2-212ENSMUST00000178555 309 ntBASIC12.59□□□□□ -0.39
Nkx2-2P42586 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.59□□□□□ -0.39
Nkx2-2P42586 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nkx2-2P42586 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Nkx2-2P42586 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms