Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Mmp9P41245 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.56□□□□□ -0.56
Mmp9P41245 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.56□□□□□ -0.56
Mmp9P41245 Gm7222-201ENSMUST00000117512 906 ntBASIC11.56□□□□□ -0.56
Mmp9P41245 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Mir3113-201ENSMUST00000175478 76 ntBASIC11.56□□□□□ -0.56
Mmp9P41245 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Mmp9P41245 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Mmp9P41245 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.56□□□□□ -0.56
Mmp9P41245 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC11.56□□□□□ -0.56
Mmp9P41245 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.56□□□□□ -0.56
Mmp9P41245 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Mmp9P41245 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Mmp9P41245 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Mmp9P41245 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Mmp9P41245 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Mmp9P41245 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Mmp9P41245 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Mmp9P41245 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC11.55□□□□□ -0.56
Mmp9P41245 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Mmp9P41245 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.55□□□□□ -0.56
Mmp9P41245 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC11.55□□□□□ -0.56
Mmp9P41245 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.55□□□□□ -0.56
Mmp9P41245 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.55□□□□□ -0.56
Mmp9P41245 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.55□□□□□ -0.56
Mmp9P41245 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Mmp9P41245 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.55□□□□□ -0.56
Mmp9P41245 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Mmp9P41245 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Mmp9P41245 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Mmp9P41245 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Mmp9P41245 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.54□□□□□ -0.56
Mmp9P41245 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Gm14701-201ENSMUST00000117156 348 ntBASIC11.54□□□□□ -0.56
Mmp9P41245 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.54□□□□□ -0.56
Mmp9P41245 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.54□□□□□ -0.56
Mmp9P41245 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.54□□□□□ -0.56
Mmp9P41245 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Mmp9P41245 Gm37230-201ENSMUST00000194491 818 ntBASIC11.54□□□□□ -0.56
Mmp9P41245 Gm45747-201ENSMUST00000212203 999 ntBASIC11.54□□□□□ -0.56
Mmp9P41245 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.54□□□□□ -0.56
Mmp9P41245 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms