Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
TfamP40630 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TfamP40630 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TfamP40630 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TfamP40630 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.33□□□□□ -0.28
TfamP40630 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.33□□□□□ -0.28
TfamP40630 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.33□□□□□ -0.28
TfamP40630 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TfamP40630 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.33□□□□□ -0.28
TfamP40630 Gm10253-201ENSMUST00000194270 940 ntBASIC13.33□□□□□ -0.28
TfamP40630 Gm2213-201ENSMUST00000197485 688 ntBASIC13.33□□□□□ -0.28
TfamP40630 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.33□□□□□ -0.28
TfamP40630 Gm5779-201ENSMUST00000218467 910 ntBASIC13.33□□□□□ -0.28
TfamP40630 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.33□□□□□ -0.28
TfamP40630 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.33□□□□□ -0.28
TfamP40630 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.33□□□□□ -0.28
TfamP40630 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.33□□□□□ -0.28
TfamP40630 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TfamP40630 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.33□□□□□ -0.28
TfamP40630 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TfamP40630 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TfamP40630 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TfamP40630 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
TfamP40630 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Gm24543-201ENSMUST00000103867 82 ntBASIC13.32□□□□□ -0.28
TfamP40630 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.32□□□□□ -0.28
TfamP40630 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.32□□□□□ -0.28
TfamP40630 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Chchd1-203ENSMUST00000224633 557 ntBASIC13.32□□□□□ -0.28
TfamP40630 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TfamP40630 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.32□□□□□ -0.28
TfamP40630 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.32□□□□□ -0.28
TfamP40630 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TfamP40630 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.31□□□□□ -0.28
TfamP40630 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TfamP40630 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms