Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sftpa1P35242 Snora73a-201ENSMUST00000082453 205 ntBASIC12.66□□□□□ -0.38
Sftpa1P35242 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sftpa1P35242 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sftpa1P35242 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sftpa1P35242 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.66□□□□□ -0.38
Sftpa1P35242 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sftpa1P35242 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sftpa1P35242 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.66□□□□□ -0.38
Sftpa1P35242 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sftpa1P35242 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.65□□□□□ -0.38
Sftpa1P35242 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Mir877-201ENSMUST00000104738 85 ntBASIC12.65□□□□□ -0.38
Sftpa1P35242 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.65□□□□□ -0.38
Sftpa1P35242 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sftpa1P35242 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sftpa1P35242 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.65□□□□□ -0.38
Sftpa1P35242 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Sftpa1P35242 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sftpa1P35242 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.64□□□□□ -0.39
Sftpa1P35242 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.64□□□□□ -0.39
Sftpa1P35242 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Sftpa1P35242 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sftpa1P35242 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sftpa1P35242 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.64□□□□□ -0.39
Sftpa1P35242 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.64□□□□□ -0.39
Sftpa1P35242 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.64□□□□□ -0.39
Sftpa1P35242 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.64□□□□□ -0.39
Sftpa1P35242 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Sftpa1P35242 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.64□□□□□ -0.39
Sftpa1P35242 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sftpa1P35242 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Sftpa1P35242 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sftpa1P35242 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sftpa1P35242 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms