Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Slc6a1P31648 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Slc6a1P31648 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Slc6a1P31648 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.83□□□□□ -0.52
Slc6a1P31648 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.83□□□□□ -0.52
Slc6a1P31648 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.83□□□□□ -0.52
Slc6a1P31648 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Gm17271-201ENSMUST00000165535 355 ntBASIC11.83□□□□□ -0.52
Slc6a1P31648 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.83□□□□□ -0.52
Slc6a1P31648 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.83□□□□□ -0.52
Slc6a1P31648 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.83□□□□□ -0.52
Slc6a1P31648 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.83□□□□□ -0.52
Slc6a1P31648 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.83□□□□□ -0.52
Slc6a1P31648 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Slc6a1P31648 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Slc6a1P31648 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Slc6a1P31648 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Slc6a1P31648 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a1P31648 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a1P31648 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.82□□□□□ -0.52
Slc6a1P31648 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Slc6a1P31648 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Syt7-205ENSMUST00000224135 1557 ntBASIC11.82□□□□□ -0.52
Slc6a1P31648 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.82□□□□□ -0.52
Slc6a1P31648 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.82□□□□□ -0.52
Slc6a1P31648 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc6a1P31648 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a1P31648 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.82□□□□□ -0.52
Slc6a1P31648 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Slc6a1P31648 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Slc6a1P31648 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms