Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Proscos-202ENSMUST00000178990 666 ntBASIC14.68□□□□□ -0.06
Mmp3P28862 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.68□□□□□ -0.06
Mmp3P28862 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.68□□□□□ -0.06
Mmp3P28862 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.68□□□□□ -0.06
Mmp3P28862 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.68□□□□□ -0.06
Mmp3P28862 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.68□□□□□ -0.06
Mmp3P28862 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Mmp3P28862 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Mmp3P28862 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Mmp3P28862 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Mmp3P28862 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Mmp3P28862 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Mmp3P28862 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.67□□□□□ -0.06
Mmp3P28862 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.67□□□□□ -0.06
Mmp3P28862 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Gm12742-201ENSMUST00000117326 410 ntBASIC14.67□□□□□ -0.06
Mmp3P28862 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.67□□□□□ -0.06
Mmp3P28862 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Mmp3P28862 Gm8810-201ENSMUST00000172895 754 ntBASIC14.67□□□□□ -0.06
Mmp3P28862 Gm27731-201ENSMUST00000185192 107 ntBASIC14.67□□□□□ -0.06
Mmp3P28862 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Gm38144-201ENSMUST00000192790 465 ntBASIC14.67□□□□□ -0.06
Mmp3P28862 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.67□□□□□ -0.06
Mmp3P28862 Gm26315-201ENSMUST00000083890 321 ntBASIC14.67□□□□□ -0.06
Mmp3P28862 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.67□□□□□ -0.06
Mmp3P28862 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Mmp3P28862 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.67□□□□□ -0.06
Mmp3P28862 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Mmp3P28862 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Mmp3P28862 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.66□□□□□ -0.06
Mmp3P28862 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.66□□□□□ -0.06
Mmp3P28862 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.66□□□□□ -0.06
Mmp3P28862 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.66□□□□□ -0.06
Mmp3P28862 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.66□□□□□ -0.06
Mmp3P28862 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Mmp3P28862 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.66□□□□□ -0.06
Mmp3P28862 Itm2b-204ENSMUST00000228637 783 ntBASIC14.66□□□□□ -0.06
Mmp3P28862 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.66□□□□□ -0.06
Mmp3P28862 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Mmp3P28862 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Mmp3P28862 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Mmp3P28862 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp3P28862 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp3P28862 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp3P28862 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.65□□□□□ -0.06
Mmp3P28862 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp3P28862 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp3P28862 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp3P28862 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Mmp3P28862 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.65□□□□□ -0.06
Mmp3P28862 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp3P28862 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp3P28862 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Mmp3P28862 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms