Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Gm43102-201ENSMUST00000201004 2324 ntBASIC18.48■□□□□ 0.55
CenpbP27790 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.48■□□□□ 0.55
CenpbP27790 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.48■□□□□ 0.55
CenpbP27790 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.48■□□□□ 0.55
CenpbP27790 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.48■□□□□ 0.55
CenpbP27790 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CenpbP27790 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CenpbP27790 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC18.47■□□□□ 0.55
CenpbP27790 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CenpbP27790 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CenpbP27790 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CenpbP27790 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CenpbP27790 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC18.47■□□□□ 0.55
CenpbP27790 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Gm7153-201ENSMUST00000117092 455 ntBASIC18.47■□□□□ 0.55
CenpbP27790 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.47■□□□□ 0.55
CenpbP27790 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.47■□□□□ 0.55
CenpbP27790 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.47■□□□□ 0.55
CenpbP27790 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.47■□□□□ 0.55
CenpbP27790 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Gm37269-201ENSMUST00000193906 1891 ntBASIC18.47■□□□□ 0.55
CenpbP27790 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC18.47■□□□□ 0.55
CenpbP27790 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CenpbP27790 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CenpbP27790 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CenpbP27790 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CenpbP27790 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Gm4459-201ENSMUST00000118750 468 ntBASIC18.46■□□□□ 0.55
CenpbP27790 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Gm27459-201ENSMUST00000184860 107 ntBASIC18.46■□□□□ 0.55
CenpbP27790 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.46■□□□□ 0.55
CenpbP27790 Birc2-201ENSMUST00000054878 378 ntBASIC18.46■□□□□ 0.55
CenpbP27790 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CenpbP27790 Gm10110-202ENSMUST00000228705 3220 ntBASIC18.46■□□□□ 0.55
CenpbP27790 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CenpbP27790 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Nudt18-203ENSMUST00000228768 1578 ntBASIC18.46■□□□□ 0.55
CenpbP27790 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CenpbP27790 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CenpbP27790 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 Grk6-207ENSMUST00000225925 2769 ntBASIC18.45■□□□□ 0.54
CenpbP27790 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CenpbP27790 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms