Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.72□□□□□ -0.37
Cd40lgP27548 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.72□□□□□ -0.37
Cd40lgP27548 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Cd40lgP27548 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Cd40lgP27548 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.71□□□□□ -0.37
Cd40lgP27548 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cd40lgP27548 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Cd40lgP27548 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.71□□□□□ -0.37
Cd40lgP27548 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Gm27838-201ENSMUST00000184829 128 ntBASIC12.71□□□□□ -0.37
Cd40lgP27548 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.71□□□□□ -0.37
Cd40lgP27548 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.71□□□□□ -0.37
Cd40lgP27548 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.71□□□□□ -0.37
Cd40lgP27548 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.71□□□□□ -0.37
Cd40lgP27548 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Cd40lgP27548 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Cd40lgP27548 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40lgP27548 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40lgP27548 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.71□□□□□ -0.38
Cd40lgP27548 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40lgP27548 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40lgP27548 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40lgP27548 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40lgP27548 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40lgP27548 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40lgP27548 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Cd40lgP27548 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cd40lgP27548 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.7□□□□□ -0.38
Cd40lgP27548 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cd40lgP27548 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.7□□□□□ -0.38
Cd40lgP27548 Gm27321-201ENSMUST00000185021 205 ntBASIC12.7□□□□□ -0.38
Cd40lgP27548 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.7□□□□□ -0.38
Cd40lgP27548 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
Cd40lgP27548 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Cd40lgP27548 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Cd40lgP27548 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cd40lgP27548 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cd40lgP27548 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cd40lgP27548 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
Cd40lgP27548 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Gm44608-201ENSMUST00000206827 855 ntBASIC12.69□□□□□ -0.38
Cd40lgP27548 Gm7775-201ENSMUST00000218871 853 ntBASIC12.69□□□□□ -0.38
Cd40lgP27548 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cd40lgP27548 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms