Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
BdnfP21237 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.21□□□□□ -0.29
BdnfP21237 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.21□□□□□ -0.29
BdnfP21237 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
BdnfP21237 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BdnfP21237 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.21□□□□□ -0.3
BdnfP21237 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BdnfP21237 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
BdnfP21237 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.21□□□□□ -0.3
BdnfP21237 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BdnfP21237 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BdnfP21237 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BdnfP21237 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.3
BdnfP21237 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
BdnfP21237 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BdnfP21237 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BdnfP21237 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
BdnfP21237 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
BdnfP21237 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BdnfP21237 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
BdnfP21237 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
BdnfP21237 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
BdnfP21237 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.2□□□□□ -0.3
BdnfP21237 Gm15957-201ENSMUST00000118893 974 ntBASIC13.2□□□□□ -0.3
BdnfP21237 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.2□□□□□ -0.3
BdnfP21237 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
BdnfP21237 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.2□□□□□ -0.3
BdnfP21237 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Gm2445-201ENSMUST00000182798 989 ntBASIC13.2□□□□□ -0.3
BdnfP21237 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
BdnfP21237 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
BdnfP21237 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.2□□□□□ -0.3
BdnfP21237 Gm43514-201ENSMUST00000198852 424 ntBASIC13.2□□□□□ -0.3
BdnfP21237 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.2□□□□□ -0.3
BdnfP21237 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.2□□□□□ -0.3
BdnfP21237 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.2□□□□□ -0.3
BdnfP21237 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
BdnfP21237 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
BdnfP21237 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
BdnfP21237 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.2□□□□□ -0.3
BdnfP21237 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.2□□□□□ -0.3
BdnfP21237 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BdnfP21237 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.19□□□□□ -0.3
BdnfP21237 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
BdnfP21237 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.19□□□□□ -0.3
BdnfP21237 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
BdnfP21237 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
BdnfP21237 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
BdnfP21237 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms