Protein–RNA interactions for Protein: P10493

Nid1, Nidogen-1, mousemouse

Predictions only

Length 1,245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1P10493 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.9□□□□□ -0.34
Nid1P10493 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.9□□□□□ -0.34
Nid1P10493 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.9□□□□□ -0.34
Nid1P10493 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nid1P10493 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.9□□□□□ -0.34
Nid1P10493 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nid1P10493 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nid1P10493 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nid1P10493 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Nid1P10493 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Nid1P10493 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nid1P10493 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nid1P10493 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.89□□□□□ -0.35
Nid1P10493 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.89□□□□□ -0.35
Nid1P10493 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.89□□□□□ -0.35
Nid1P10493 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.89□□□□□ -0.35
Nid1P10493 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.89□□□□□ -0.35
Nid1P10493 Acot6-202ENSMUST00000222921 3622 ntBASIC12.89□□□□□ -0.35
Nid1P10493 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.89□□□□□ -0.35
Nid1P10493 Gm14701-201ENSMUST00000117156 348 ntBASIC12.89□□□□□ -0.35
Nid1P10493 Gm22175-201ENSMUST00000175007 78 ntBASIC12.89□□□□□ -0.35
Nid1P10493 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Nid1P10493 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nid1P10493 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.88□□□□□ -0.35
Nid1P10493 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nid1P10493 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Gm38294-201ENSMUST00000192831 381 ntBASIC12.88□□□□□ -0.35
Nid1P10493 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.88□□□□□ -0.35
Nid1P10493 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Nid1P10493 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.88□□□□□ -0.35
Nid1P10493 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.88□□□□□ -0.35
Nid1P10493 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.88□□□□□ -0.35
Nid1P10493 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.88□□□□□ -0.35
Nid1P10493 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Nid1P10493 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nid1P10493 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nid1P10493 Grk6-205ENSMUST00000224653 2976 ntBASIC12.87□□□□□ -0.35
Nid1P10493 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nid1P10493 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nid1P10493 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nid1P10493 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nid1P10493 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Nid1P10493 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Nid1P10493 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms