Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TnfP06804 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TnfP06804 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.55□□□□□ -0.08
TnfP06804 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TnfP06804 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Gm27486-201ENSMUST00000184923 80 ntBASIC14.55□□□□□ -0.08
TnfP06804 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.55□□□□□ -0.08
TnfP06804 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.55□□□□□ -0.08
TnfP06804 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TnfP06804 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TnfP06804 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.55□□□□□ -0.08
TnfP06804 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.55□□□□□ -0.08
TnfP06804 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TnfP06804 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TnfP06804 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.54□□□□□ -0.08
TnfP06804 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
TnfP06804 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.54□□□□□ -0.08
TnfP06804 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.54□□□□□ -0.08
TnfP06804 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TnfP06804 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.54□□□□□ -0.08
TnfP06804 Gm8652-201ENSMUST00000181363 964 ntBASIC14.54□□□□□ -0.08
TnfP06804 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TnfP06804 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TnfP06804 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TnfP06804 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TnfP06804 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.54□□□□□ -0.08
TnfP06804 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TnfP06804 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TnfP06804 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
TnfP06804 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.53□□□□□ -0.08
TnfP06804 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TnfP06804 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.53□□□□□ -0.08
TnfP06804 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.53□□□□□ -0.08
TnfP06804 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.53□□□□□ -0.08
TnfP06804 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TnfP06804 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Gm38671-201ENSMUST00000200573 130 ntBASIC14.53□□□□□ -0.08
TnfP06804 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TnfP06804 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TnfP06804 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms