Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.04□□□□□ -0.8
TcraP01849 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
TcraP01849 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.03□□□□□ -0.8
TcraP01849 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
TcraP01849 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Gm11764-201ENSMUST00000120221 623 ntBASIC10.03□□□□□ -0.8
TcraP01849 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC10.03□□□□□ -0.8
TcraP01849 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.03□□□□□ -0.8
TcraP01849 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.03□□□□□ -0.8
TcraP01849 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
TcraP01849 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
TcraP01849 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
TcraP01849 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.02□□□□□ -0.8
TcraP01849 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
TcraP01849 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
TcraP01849 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
TcraP01849 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
TcraP01849 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
TcraP01849 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.02□□□□□ -0.8
TcraP01849 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
TcraP01849 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
TcraP01849 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
TcraP01849 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
TcraP01849 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC10.02□□□□□ -0.81
TcraP01849 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.02□□□□□ -0.81
TcraP01849 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
TcraP01849 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
TcraP01849 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Olfr286-202ENSMUST00000205305 969 ntBASIC10.02□□□□□ -0.81
TcraP01849 AC161829.1-201ENSMUST00000220298 281 ntBASIC10.02□□□□□ -0.81
TcraP01849 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.02□□□□□ -0.81
TcraP01849 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
TcraP01849 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms