Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Hcn1O88704 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.2□□□□□ -0.3
Hcn1O88704 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Hcn1O88704 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.2□□□□□ -0.3
Hcn1O88704 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.2□□□□□ -0.3
Hcn1O88704 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Gm27680-201ENSMUST00000184192 160 ntBASIC13.2□□□□□ -0.3
Hcn1O88704 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Shd-206ENSMUST00000225145 998 ntBASIC13.2□□□□□ -0.3
Hcn1O88704 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.2□□□□□ -0.3
Hcn1O88704 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Hcn1O88704 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Hcn1O88704 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.19□□□□□ -0.3
Hcn1O88704 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hcn1O88704 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.19□□□□□ -0.3
Hcn1O88704 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hcn1O88704 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Hcn1O88704 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
Hcn1O88704 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Gm27306-201ENSMUST00000183970 107 ntBASIC13.19□□□□□ -0.3
Hcn1O88704 Gm44344-201ENSMUST00000200287 129 ntBASIC13.19□□□□□ -0.3
Hcn1O88704 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Hcn1O88704 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Hcn1O88704 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Hcn1O88704 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hcn1O88704 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hcn1O88704 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hcn1O88704 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms