Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Gm37736-201ENSMUST00000193564 2802 ntBASIC17.49■□□□□ 0.39
Ubr1O70481 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ubr1O70481 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.49■□□□□ 0.39
Ubr1O70481 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.48■□□□□ 0.39
Ubr1O70481 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Gm13316-201ENSMUST00000140537 691 ntBASIC17.48■□□□□ 0.39
Ubr1O70481 Gm18584-201ENSMUST00000203098 964 ntBASIC17.48■□□□□ 0.39
Ubr1O70481 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC17.48■□□□□ 0.39
Ubr1O70481 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ubr1O70481 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Ubr1O70481 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Ubr1O70481 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.48■□□□□ 0.39
Ubr1O70481 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.48■□□□□ 0.39
Ubr1O70481 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Ubr1O70481 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ubr1O70481 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Ubr1O70481 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ubr1O70481 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 Gm5466-201ENSMUST00000119395 1890 ntBASIC17.47■□□□□ 0.39
Ubr1O70481 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC17.47■□□□□ 0.39
Ubr1O70481 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC17.47■□□□□ 0.39
Ubr1O70481 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.47■□□□□ 0.39
Ubr1O70481 Gm10608-202ENSMUST00000213924 676 ntBASIC17.47■□□□□ 0.39
Ubr1O70481 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ubr1O70481 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Ubr1O70481 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.47■□□□□ 0.39
Ubr1O70481 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ubr1O70481 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Ubr1O70481 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Ubr1O70481 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ubr1O70481 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.46■□□□□ 0.39
Ubr1O70481 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC17.46■□□□□ 0.39
Ubr1O70481 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC17.46■□□□□ 0.39
Ubr1O70481 Mir7070-201ENSMUST00000183657 86 ntBASIC17.46■□□□□ 0.39
Ubr1O70481 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.46■□□□□ 0.39
Ubr1O70481 Morn2-202ENSMUST00000227729 656 ntBASIC17.46■□□□□ 0.39
Ubr1O70481 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ubr1O70481 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ubr1O70481 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ubr1O70481 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC17.46■□□□□ 0.39
Ubr1O70481 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ubr1O70481 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Ubr1O70481 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Ubr1O70481 Gm24255-201ENSMUST00000104481 128 ntBASIC17.45■□□□□ 0.38
Ubr1O70481 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ubr1O70481 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.45■□□□□ 0.38
Ubr1O70481 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ubr1O70481 n-R5s77-201ENSMUST00000083757 119 ntBASIC17.45■□□□□ 0.38
Ubr1O70481 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.45■□□□□ 0.38
Ubr1O70481 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ubr1O70481 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.45■□□□□ 0.38
Ubr1O70481 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Ubr1O70481 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms