Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.28■□□□□ 0.36
Vamp4O70480 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Vamp4O70480 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Vamp4O70480 Gm29608-201ENSMUST00000190444 463 ntBASIC17.28■□□□□ 0.36
Vamp4O70480 Gm38223-201ENSMUST00000194484 695 ntBASIC17.28■□□□□ 0.36
Vamp4O70480 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.28■□□□□ 0.36
Vamp4O70480 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.28■□□□□ 0.36
Vamp4O70480 Gm8463-201ENSMUST00000208573 613 ntBASIC17.28■□□□□ 0.36
Vamp4O70480 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vamp4O70480 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vamp4O70480 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vamp4O70480 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Vamp4O70480 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vamp4O70480 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vamp4O70480 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vamp4O70480 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vamp4O70480 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vamp4O70480 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vamp4O70480 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vamp4O70480 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.27■□□□□ 0.36
Vamp4O70480 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Vamp4O70480 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Vamp4O70480 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.27■□□□□ 0.36
Vamp4O70480 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC17.27■□□□□ 0.36
Vamp4O70480 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.27■□□□□ 0.36
Vamp4O70480 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vamp4O70480 Gm15429-201ENSMUST00000151268 798 ntBASIC17.27■□□□□ 0.36
Vamp4O70480 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Gm7653-201ENSMUST00000214567 508 ntBASIC17.27■□□□□ 0.36
Vamp4O70480 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vamp4O70480 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vamp4O70480 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC17.27■□□□□ 0.36
Vamp4O70480 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.27■□□□□ 0.35
Vamp4O70480 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vamp4O70480 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vamp4O70480 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Vamp4O70480 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.27■□□□□ 0.35
Vamp4O70480 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vamp4O70480 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.27■□□□□ 0.35
Vamp4O70480 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vamp4O70480 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vamp4O70480 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vamp4O70480 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vamp4O70480 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.26■□□□□ 0.35
Vamp4O70480 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Gm11918-201ENSMUST00000121660 179 ntBASIC17.26■□□□□ 0.35
Vamp4O70480 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.26■□□□□ 0.35
Vamp4O70480 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.26■□□□□ 0.35
Vamp4O70480 Gm38144-201ENSMUST00000192790 465 ntBASIC17.26■□□□□ 0.35
Vamp4O70480 Gm42550-201ENSMUST00000201553 960 ntBASIC17.26■□□□□ 0.35
Vamp4O70480 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Vamp4O70480 AC073947.2-201ENSMUST00000215888 1130 ntBASIC17.26■□□□□ 0.35
Vamp4O70480 AC150560.1-201ENSMUST00000227731 1187 ntBASIC17.26■□□□□ 0.35
Vamp4O70480 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Vamp4O70480 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Vamp4O70480 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.26■□□□□ 0.35
Vamp4O70480 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.25■□□□□ 0.35
Vamp4O70480 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Vamp4O70480 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vamp4O70480 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Vamp4O70480 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vamp4O70480 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vamp4O70480 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Vamp4O70480 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Vamp4O70480 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 109.7 ms