Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Cldn5O54942 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Gm15770-201ENSMUST00000117498 584 ntBASIC14.24□□□□□ -0.13
Cldn5O54942 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.24□□□□□ -0.13
Cldn5O54942 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.24□□□□□ -0.13
Cldn5O54942 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.24□□□□□ -0.13
Cldn5O54942 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.24□□□□□ -0.13
Cldn5O54942 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Gm8602-201ENSMUST00000184045 607 ntBASIC14.24□□□□□ -0.13
Cldn5O54942 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cldn5O54942 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn5O54942 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cldn5O54942 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Cldn5O54942 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cldn5O54942 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cldn5O54942 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldn5O54942 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.23□□□□□ -0.13
Cldn5O54942 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cldn5O54942 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.23□□□□□ -0.13
Cldn5O54942 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.23□□□□□ -0.13
Cldn5O54942 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.23□□□□□ -0.13
Cldn5O54942 Gm5035-201ENSMUST00000215581 927 ntBASIC14.23□□□□□ -0.13
Cldn5O54942 Gm17330-201ENSMUST00000221047 165 ntBASIC14.23□□□□□ -0.13
Cldn5O54942 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cldn5O54942 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.23□□□□□ -0.13
Cldn5O54942 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cldn5O54942 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cldn5O54942 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.22□□□□□ -0.13
Cldn5O54942 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn5O54942 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.22□□□□□ -0.13
Cldn5O54942 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldn5O54942 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cldn5O54942 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.22□□□□□ -0.13
Cldn5O54942 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.22□□□□□ -0.13
Cldn5O54942 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldn5O54942 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldn5O54942 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cldn5O54942 Gm9002-201ENSMUST00000178437 499 ntBASIC14.22□□□□□ -0.13
Cldn5O54942 Gm18187-201ENSMUST00000196476 984 ntBASIC14.22□□□□□ -0.13
Cldn5O54942 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.22□□□□□ -0.13
Cldn5O54942 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Cldn5O54942 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Cldn5O54942 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.22□□□□□ -0.13
Cldn5O54942 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cldn5O54942 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms