Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Sdc4O35988 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Sdc4O35988 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Sdc4O35988 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
Sdc4O35988 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.14□□□□□ -0.15
Sdc4O35988 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.14□□□□□ -0.15
Sdc4O35988 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Gm15824-201ENSMUST00000119516 955 ntBASIC14.14□□□□□ -0.15
Sdc4O35988 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.14□□□□□ -0.15
Sdc4O35988 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Gm5035-201ENSMUST00000215581 927 ntBASIC14.14□□□□□ -0.15
Sdc4O35988 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.14□□□□□ -0.15
Sdc4O35988 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.14□□□□□ -0.15
Sdc4O35988 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sdc4O35988 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.13□□□□□ -0.15
Sdc4O35988 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.13□□□□□ -0.15
Sdc4O35988 Mir1894-201ENSMUST00000122802 81 ntBASIC14.13□□□□□ -0.15
Sdc4O35988 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.13□□□□□ -0.15
Sdc4O35988 Gm6244-201ENSMUST00000178732 841 ntBASIC14.13□□□□□ -0.15
Sdc4O35988 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sdc4O35988 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Gm2495-201ENSMUST00000191160 466 ntBASIC14.13□□□□□ -0.15
Sdc4O35988 Gm38223-201ENSMUST00000194484 695 ntBASIC14.13□□□□□ -0.15
Sdc4O35988 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.13□□□□□ -0.15
Sdc4O35988 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.13□□□□□ -0.15
Sdc4O35988 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sdc4O35988 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sdc4O35988 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Sdc4O35988 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.13□□□□□ -0.15
Sdc4O35988 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.13□□□□□ -0.15
Sdc4O35988 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sdc4O35988 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.12□□□□□ -0.15
Sdc4O35988 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sdc4O35988 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sdc4O35988 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Gm4984-201ENSMUST00000115987 360 ntBASIC14.12□□□□□ -0.15
Sdc4O35988 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.12□□□□□ -0.15
Sdc4O35988 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.12□□□□□ -0.15
Sdc4O35988 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Sdc4O35988 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sdc4O35988 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Sdc4O35988 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms