Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Efnb3O35393 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Efnb3O35393 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.87□□□□□ -0.67
Efnb3O35393 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 Gm14494-201ENSMUST00000118786 435 ntBASIC10.87□□□□□ -0.67
Efnb3O35393 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC10.87□□□□□ -0.67
Efnb3O35393 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.87□□□□□ -0.67
Efnb3O35393 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Efnb3O35393 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Efnb3O35393 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Efnb3O35393 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.86□□□□□ -0.67
Efnb3O35393 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Efnb3O35393 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Gm17271-201ENSMUST00000165535 355 ntBASIC10.86□□□□□ -0.67
Efnb3O35393 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.86□□□□□ -0.67
Efnb3O35393 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.86□□□□□ -0.67
Efnb3O35393 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Efnb3O35393 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Efnb3O35393 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Efnb3O35393 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Efnb3O35393 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Efnb3O35393 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.85□□□□□ -0.67
Efnb3O35393 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Efnb3O35393 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Efnb3O35393 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Efnb3O35393 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Efnb3O35393 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms