Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ebf3O08791 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.28□□□□□ -0.12
Ebf3O08791 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ebf3O08791 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.28□□□□□ -0.12
Ebf3O08791 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.28□□□□□ -0.12
Ebf3O08791 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.28□□□□□ -0.12
Ebf3O08791 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.28□□□□□ -0.12
Ebf3O08791 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Mir1938-201ENSMUST00000158746 100 ntBASIC14.28□□□□□ -0.12
Ebf3O08791 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.28□□□□□ -0.12
Ebf3O08791 Gm44608-201ENSMUST00000206827 855 ntBASIC14.28□□□□□ -0.12
Ebf3O08791 Gm18027-201ENSMUST00000218947 619 ntBASIC14.28□□□□□ -0.12
Ebf3O08791 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ebf3O08791 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ebf3O08791 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ebf3O08791 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.27□□□□□ -0.12
Ebf3O08791 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ebf3O08791 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.27□□□□□ -0.12
Ebf3O08791 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Ebf3O08791 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ebf3O08791 Mir1982-201ENSMUST00000157368 74 ntBASIC14.27□□□□□ -0.13
Ebf3O08791 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.27□□□□□ -0.13
Ebf3O08791 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.27□□□□□ -0.13
Ebf3O08791 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Gm17794-201ENSMUST00000220252 955 ntBASIC14.27□□□□□ -0.13
Ebf3O08791 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ebf3O08791 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ebf3O08791 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.27□□□□□ -0.13
Ebf3O08791 Acot6-202ENSMUST00000222921 3622 ntBASIC14.27□□□□□ -0.13
Ebf3O08791 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Ebf3O08791 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Ebf3O08791 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ebf3O08791 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.27□□□□□ -0.13
Ebf3O08791 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ebf3O08791 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ebf3O08791 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ebf3O08791 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.26□□□□□ -0.13
Ebf3O08791 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Ebf3O08791 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Ebf3O08791 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ebf3O08791 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ebf3O08791 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Ebf3O08791 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.26□□□□□ -0.13
Ebf3O08791 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ebf3O08791 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.26□□□□□ -0.13
Ebf3O08791 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.26□□□□□ -0.13
Ebf3O08791 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.26□□□□□ -0.13
Ebf3O08791 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.26□□□□□ -0.13
Ebf3O08791 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.26□□□□□ -0.13
Ebf3O08791 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms