Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Chrna9G3X8Z7 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gm17837-201ENSMUST00000186435 985 ntBASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.76□□□□□ -0.05
Chrna9G3X8Z7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Chrna9G3X8Z7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms