Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.39□□□□□ -0.43
Pcdh1F7BJK1 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Gm14494-201ENSMUST00000118786 435 ntBASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Gm18057-201ENSMUST00000208220 503 ntBASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh1F7BJK1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gm11025-201ENSMUST00000140773 466 ntBASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gm37444-201ENSMUST00000193605 439 ntBASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Gm18027-201ENSMUST00000218947 619 ntBASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh1F7BJK1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms