Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdh11xF6ZNL5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Gm2423-201ENSMUST00000074863 733 ntBASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh11xF6ZNL5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh11xF6ZNL5 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gm16215-201ENSMUST00000161990 637 ntBASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Gm20632-201ENSMUST00000176760 2427 ntBASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh11xF6ZNL5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms