Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Mir6977-201ENSMUST00000184960 64 ntBASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cpsf4lE9Q2N0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Gm27437-201ENSMUST00000183429 107 ntBASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Gm5279-201ENSMUST00000199575 745 ntBASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Gm2423-201ENSMUST00000074863 733 ntBASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cpsf4lE9Q2N0 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Syt7-205ENSMUST00000224135 1557 ntBASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Gm25925-201ENSMUST00000158314 306 ntBASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Gm27772-201ENSMUST00000184900 187 ntBASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.62□□□□□ -0.55
Cpsf4lE9Q2N0 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms