Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Syt7-205ENSMUST00000224135 1557 ntBASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Gm45328-201ENSMUST00000210942 917 ntBASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Nkx6-2D3Z4R4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Nkx6-2D3Z4R4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms