Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Olfr129-201ENSMUST00000122318 993 ntBASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm29518-201ENSMUST00000190858 372 ntBASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.38□□□□□ -0.43
Ccnb1ip1D3Z3K2 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm15372-201ENSMUST00000120729 834 ntBASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm12882-201ENSMUST00000121696 517 ntBASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm11780-201ENSMUST00000136880 516 ntBASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccnb1ip1D3Z3K2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccnb1ip1D3Z3K2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms