Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Gm5479-201ENSMUST00000160578 435 ntBASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Gm17271-201ENSMUST00000165535 355 ntBASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Gm11127A7VMS2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Gm37230-201ENSMUST00000194491 818 ntBASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Gm11127A7VMS2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Gm11127A7VMS2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms