Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gm26315-201ENSMUST00000083890 321 ntBASIC14.31□□□□□ -0.12
Scn1aA2APX8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.31□□□□□ -0.12
Scn1aA2APX8 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.31□□□□□ -0.12
Scn1aA2APX8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.31□□□□□ -0.12
Scn1aA2APX8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.31□□□□□ -0.12
Scn1aA2APX8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.3□□□□□ -0.12
Scn1aA2APX8 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.3□□□□□ -0.12
Scn1aA2APX8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Scn1aA2APX8 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.3□□□□□ -0.12
Scn1aA2APX8 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn1aA2APX8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.29□□□□□ -0.12
Scn1aA2APX8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 AY702102-202ENSMUST00000194651 1173 ntBASIC14.29□□□□□ -0.12
Scn1aA2APX8 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.29□□□□□ -0.12
Scn1aA2APX8 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.29□□□□□ -0.12
Scn1aA2APX8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Gm8810-201ENSMUST00000172895 754 ntBASIC14.29□□□□□ -0.12
Scn1aA2APX8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Scn1aA2APX8 Gm27839-201ENSMUST00000184242 106 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms