Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim17A0A504 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim17A0A504 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Smim17A0A504 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Smim17A0A504 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.44□□□□□ -0.42
Smim17A0A504 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smim17A0A504 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Smim17A0A504 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Smim17A0A504 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Smim17A0A504 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Smim17A0A504 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim17A0A504 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim17A0A504 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim17A0A504 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.43□□□□□ -0.42
Smim17A0A504 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Smim17A0A504 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.43□□□□□ -0.42
Smim17A0A504 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim17A0A504 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Smim17A0A504 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Smim17A0A504 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.43□□□□□ -0.42
Smim17A0A504 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.43□□□□□ -0.42
Smim17A0A504 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.43□□□□□ -0.42
Smim17A0A504 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.43□□□□□ -0.42
Smim17A0A504 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Smim17A0A504 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Smim17A0A504 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smim17A0A504 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Smim17A0A504 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Smim17A0A504 Gm14859-201ENSMUST00000117752 357 ntBASIC12.42□□□□□ -0.42
Smim17A0A504 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.42□□□□□ -0.42
Smim17A0A504 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.42□□□□□ -0.42
Smim17A0A504 Gm37230-201ENSMUST00000194491 818 ntBASIC12.42□□□□□ -0.42
Smim17A0A504 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.42□□□□□ -0.42
Smim17A0A504 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smim17A0A504 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Smim17A0A504 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.42□□□□□ -0.42
Smim17A0A504 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Smim17A0A504 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Smim17A0A504 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Smim17A0A504 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Smim17A0A504 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms