Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm27321-201ENSMUST00000185021 205 ntBASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm21470-201ENSMUST00000187680 696 ntBASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm7775-201ENSMUST00000218871 853 ntBASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Gm9063-201ENSMUST00000223299 582 ntBASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Lnp1A0A1B0GSK3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Lnp1A0A1B0GSK3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Lnp1A0A1B0GSK3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Lnp1A0A1B0GSK3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms