Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.69■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm27437-201ENSMUST00000183429 107 ntBASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Grk6-205ENSMUST00000224653 2976 ntBASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm15770-201ENSMUST00000117498 584 ntBASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm26464-201ENSMUST00000157094 305 ntBASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm19078-201ENSMUST00000206311 727 ntBASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Syt7-205ENSMUST00000224135 1557 ntBASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Atg4a-psA0A0G2JFS9 Gm24447-201ENSMUST00000083977 338 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms