Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Igkv8-27A0A0G2JF28 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Igkv8-27A0A0G2JF28 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Igkv8-27A0A0G2JF28 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
Igkv8-27A0A0G2JF28 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Igkv8-27A0A0G2JF28 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC8.59□□□□□ -1.04
Igkv8-27A0A0G2JF28 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
Igkv8-27A0A0G2JF28 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm43134-201ENSMUST00000199434 1886 ntBASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm8597-201ENSMUST00000191525 1109 ntBASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm45747-201ENSMUST00000212203 999 ntBASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm10812-201ENSMUST00000099864 546 ntBASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Igkv8-27A0A0G2JF28 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Igkv8-27A0A0G2JF28 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms