Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Mir6956-201ENSMUST00000183598 62 ntBASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Gm5425-201ENSMUST00000214125 459 ntBASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Gm7775-201ENSMUST00000218871 853 ntBASIC13.79□□□□□ -0.2
H2afb2S4R1M3 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
H2afb2S4R1M3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
H2afb2S4R1M3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb2S4R1M3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb2S4R1M3 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb2S4R1M3 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.77□□□□□ -0.2
H2afb2S4R1M3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
H2afb2S4R1M3 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
H2afb2S4R1M3 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
H2afb2S4R1M3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms