Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm42550-201ENSMUST00000201553 960 ntBASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scn8aQ9WTU3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn8aQ9WTU3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Gm8213-201ENSMUST00000118191 441 ntBASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Gm13123-201ENSMUST00000122173 492 ntBASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn8aQ9WTU3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Gm23931-201ENSMUST00000103842 109 ntBASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Gm5687-201ENSMUST00000118252 640 ntBASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.73□□□□□ -0.21
Scn8aQ9WTU3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms