Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Gm29705-201ENSMUST00000212598 474 ntBASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cpsf1Q9EPU4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Gm37497-201ENSMUST00000195830 798 ntBASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Gm45841-201ENSMUST00000207700 164 ntBASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Gm43273-201ENSMUST00000199649 2594 ntBASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cpsf1Q9EPU4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cpsf1Q9EPU4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cpsf1Q9EPU4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
Cpsf1Q9EPU4 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cpsf1Q9EPU4 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Gm37922-201ENSMUST00000195596 455 ntBASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cpsf1Q9EPU4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Gm5639-201ENSMUST00000122305 2403 ntBASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Gm2420-202ENSMUST00000202224 2249 ntBASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cpsf1Q9EPU4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Gm12384-201ENSMUST00000119228 919 ntBASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Gm7029-201ENSMUST00000173226 450 ntBASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Gm27682-201ENSMUST00000183930 110 ntBASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Gm18054-201ENSMUST00000207539 555 ntBASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.74■□□□□ 0.59
Cpsf1Q9EPU4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms