Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Hmg20aQ9DC33 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Gm13464-201ENSMUST00000119418 935 ntBASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmg20aQ9DC33 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Ank2-226ENSMUST00000189368 339 ntBASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hmg20aQ9DC33 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hmg20aQ9DC33 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms