Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2af1Q9D883 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2af1Q9D883 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.49
U2af1Q9D883 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.08■□□□□ 0.49
U2af1Q9D883 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2af1Q9D883 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
U2af1Q9D883 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
U2af1Q9D883 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
U2af1Q9D883 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC18.08■□□□□ 0.48
U2af1Q9D883 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U2af1Q9D883 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U2af1Q9D883 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U2af1Q9D883 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
U2af1Q9D883 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U2af1Q9D883 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U2af1Q9D883 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC18.08■□□□□ 0.48
U2af1Q9D883 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U2af1Q9D883 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
U2af1Q9D883 Gm21451-201ENSMUST00000111062 2775 ntBASIC18.08■□□□□ 0.48
U2af1Q9D883 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.07■□□□□ 0.48
U2af1Q9D883 Gm20632-201ENSMUST00000176760 2427 ntBASIC18.07■□□□□ 0.48
U2af1Q9D883 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.07■□□□□ 0.48
U2af1Q9D883 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.07■□□□□ 0.48
U2af1Q9D883 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Ighv5-13-201ENSMUST00000193550 290 ntBASIC18.07■□□□□ 0.48
U2af1Q9D883 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
U2af1Q9D883 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
U2af1Q9D883 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC18.07■□□□□ 0.48
U2af1Q9D883 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
U2af1Q9D883 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC18.07■□□□□ 0.48
U2af1Q9D883 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
U2af1Q9D883 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
U2af1Q9D883 Gm13689-201ENSMUST00000119360 685 ntBASIC18.06■□□□□ 0.48
U2af1Q9D883 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.06■□□□□ 0.48
U2af1Q9D883 Gm27701-201ENSMUST00000184498 110 ntBASIC18.06■□□□□ 0.48
U2af1Q9D883 Gm28911-201ENSMUST00000188837 117 ntBASIC18.06■□□□□ 0.48
U2af1Q9D883 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.06■□□□□ 0.48
U2af1Q9D883 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.06■□□□□ 0.48
U2af1Q9D883 AC155252.1-201ENSMUST00000226462 1208 ntBASIC18.06■□□□□ 0.48
U2af1Q9D883 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
U2af1Q9D883 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
U2af1Q9D883 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
U2af1Q9D883 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
U2af1Q9D883 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC18.06■□□□□ 0.48
U2af1Q9D883 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2af1Q9D883 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.05■□□□□ 0.48
U2af1Q9D883 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
U2af1Q9D883 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2af1Q9D883 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms