Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Gm13453-201ENSMUST00000118708 357 ntBASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Mir6956-201ENSMUST00000183598 62 ntBASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Gm38294-201ENSMUST00000192831 381 ntBASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Gm44344-201ENSMUST00000200287 129 ntBASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ndc80Q9D0F1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ndc80Q9D0F1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Gm17837-201ENSMUST00000186435 985 ntBASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Gm9229-201ENSMUST00000222777 126 ntBASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ndc80Q9D0F1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Gm13223-201ENSMUST00000118609 747 ntBASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Gm33320-201ENSMUST00000192232 530 ntBASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Gm18027-201ENSMUST00000218947 619 ntBASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ndc80Q9D0F1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms