Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shmt2Q9CZN7 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gm27622-201ENSMUST00000183779 60 ntBASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gm45453-201ENSMUST00000211758 853 ntBASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shmt2Q9CZN7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Gm24543-201ENSMUST00000103867 82 ntBASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 AA543401-201ENSMUST00000164248 1269 ntBASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Gm18041-201ENSMUST00000218210 618 ntBASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Shmt2Q9CZN7 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms