Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.55■□□□□ 0.08
Chd1lQ9CXF7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chd1lQ9CXF7 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chd1lQ9CXF7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Gm42480-201ENSMUST00000198434 2595 ntBASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chd1lQ9CXF7 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chd1lQ9CXF7 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms