Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.2■□□□□ 0.18
Smc3Q9CW03 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Smc3Q9CW03 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.19■□□□□ 0.18
Smc3Q9CW03 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Gm43364-201ENSMUST00000196046 3274 ntBASIC16.19■□□□□ 0.18
Smc3Q9CW03 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.19■□□□□ 0.18
Smc3Q9CW03 Gm6916-202ENSMUST00000205523 195 ntBASIC16.19■□□□□ 0.18
Smc3Q9CW03 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.19■□□□□ 0.18
Smc3Q9CW03 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Smc3Q9CW03 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.18■□□□□ 0.18
Smc3Q9CW03 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.18■□□□□ 0.18
Smc3Q9CW03 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Smc3Q9CW03 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Smc3Q9CW03 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm22065-201ENSMUST00000103753 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm22066-201ENSMUST00000103761 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm24932-201ENSMUST00000103763 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm24115-201ENSMUST00000103799 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm22190-201ENSMUST00000103827 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm22191-201ENSMUST00000103831 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm24721-201ENSMUST00000103849 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm28018-201ENSMUST00000103869 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm26399-201ENSMUST00000103937 110 ntBASIC16.17■□□□□ 0.18
Smc3Q9CW03 Gm25349-201ENSMUST00000177728 110 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms