Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Gm45668-201ENSMUST00000211271 493 ntBASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Atxn3Q9CVD2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Gm11524-201ENSMUST00000119349 807 ntBASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Gm6180-201ENSMUST00000065243 498 ntBASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Atxn3Q9CVD2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Gm13689-201ENSMUST00000119360 685 ntBASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Gm12485-201ENSMUST00000119641 291 ntBASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Gm23984-201ENSMUST00000157139 203 ntBASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Gm27772-201ENSMUST00000184900 187 ntBASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Atxn3Q9CVD2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Mir6392-201ENSMUST00000184924 108 ntBASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 AC156560.2-201ENSMUST00000221232 264 ntBASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Atxn3Q9CVD2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms