Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Gm16215-201ENSMUST00000161990 637 ntBASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Syt7-204ENSMUST00000223586 1344 ntBASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sft2d3Q9CSV6 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sft2d3Q9CSV6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sft2d3Q9CSV6 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sft2d3Q9CSV6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Sft2d3Q9CSV6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sft2d3Q9CSV6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Sft2d3Q9CSV6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sft2d3Q9CSV6 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Gm9229-201ENSMUST00000222777 126 ntBASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.77□□□□□ -0.53
Sft2d3Q9CSV6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Gm10275-202ENSMUST00000168697 495 ntBASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Gm44855-201ENSMUST00000205725 362 ntBASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Gm2423-201ENSMUST00000074863 733 ntBASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Gm10275-201ENSMUST00000092620 635 ntBASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sft2d3Q9CSV6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms